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Biological
Computing II (C2)
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Semester: 2008 2nd Semester, TIGP-BP
Place: Institute
of Information Science, Academia Sinica, New
Building, Rm. 107
Time: Thursday Mornings
, 9:00- 12:00 AM
Topic:
References :
1. Mathematical Statistics and Data Analysis, 3rd
edition, by John Rice.
2. Primer in Biostatistics (5th ed.). Glantz.
3. Statistical Methods in Bioinformatics. Ewens and
Grant. Published by Springer.
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Week |
Date |
Topics |
Lecturers |
Slides |
Online |
Others |
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1 |
2008/02/21 |
Probability (r.v.'s, probab. dist.'s, discrete r.v.,
function of r.v.'s, etc) |
Hsin-Chou Yang |
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2 |
2008/02/27
(Wed.)2-5pm |
Basic Statistics (continuous r.v.'s, their dist.'s,
indep. of events, etc.) |
Hsin-Chou Yang |
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3 |
2008/03/06 |
Random vectors (bivariate normal, indep't r.v.'s,
cond'l expectation, multi-var. normal dist.
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Hsin-Chou Yang |
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4 |
2008/03/13 |
Regression I (R^2, F-test, collinearity, etc) |
Hsin-Sheng Yuan |
N/A
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N/A |
(hw)
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5 |
2008/03/20
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Regression II (multiple regr., logistic regr.) |
Hsin-Sheng Yuan
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N/A |
(hw2) |
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6 |
2008/03/27
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ANOVA |
Hsin-Sheng Yuan
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N/A |
N/A |
(hw3) |
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7 |
2008/04/02
(Wed.)2-5pm |
Estimation (Parametric +NP 1- and 2 -sample est. for
mean, dispersion, C.I., MLE, etc) |
Henry Horng-Shing Lu |
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8 |
2008/04/10 |
Review week |
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9 |
2008/04/17 |
Midterm Exam |
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10 |
2008/04/23
(Wed.)2-5pm |
Hypothesis testing (1- and 2-sample test for mean
and var., LR test, Neyman-Pearson lemma, multiple
testing) |
Henry Horng-Shing Lu
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11 |
2008/04/30
(Wed.)2-5pm |
Nonparametric methods (permutation test, resampling
methods (Jacknife+Bootstrap)) |
Henry Horng-Shing Lu |
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12 |
2008/05/08 |
Analysis of Microarray data I (QC, normalization,
imputation, etc) |
Grace S. Shieh
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13 |
2008/05/15 |
Analysis of Microarray data II (diff'ly expressed
genes, multiple testing, Survival analysis)
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Grace S. Shieh |
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(Exercise) |
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14 |
2008/05/22 |
Proximity measures (both categorical and conti.
data, Fisher's exact test. Chi-square test,
relationship of multiple variables)
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Chen, Ting-Li
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15 |
2008/05/29 |
Clustering |
Chen, Ting-Li
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16 |
2008/06/05 |
Classification |
Chen, Ting-Li
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(Exercise) |
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17 |
2008/06/12 |
Review week |
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18 |
2008/06/19 |
Final Exam |
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