toppic
news pstudents academic cstudents faculty about contact link
news green02
 
 
 
   
   
   
 
   
   
Faculty
Core Faculty
Institute of Information Science 中央研究院資訊科學研究所

 

Dr. Tsai , Huai-Kuang 蔡懷寬 hktsai@iis.sinica.edu.tw 
Students:  Liu, Wan-Hsin; Chen-Kai Shiau
● Evolutionary algorithm
● Bioinformatics
● Regulatory mechanism
● Metagenomics
 

 

Dr. Sung , Ting-Yi 宋定懿 tsung@iis.sinica.edu.tw
Students:  Thejkiran Pitti
● Graph algorithms
● Interconnection networks for parallel and distributed systems
● Bioinformatics with focus on proteomics studies
● Mathematical programming

 
Dr.  Hsu, Wen-Lian  許聞廉 hsu@iis.sinica.edu.tw
Students: Cheng-Wei Cheng; Neha Warikoo; Onkar Singh
Analysis of algorithms, graph theory.
Search methods in artificial intelligence.
Bioinformatics, computational biology.
Computational linguistics.
Natural language understanding.
Intelligent agent systems
 
 
 
Institue of Biomedical Science 中央研究院 生物醫學科學研究所
 

Dr. Hwang, Ming-Jing 黃明經 mjhwang@ibms.sinica.edu.tw
Students:
Bioinformatics
Computational biology
Systems biology
 

Dr. Jou, Yuh-Shan 周玉山 jou@ibms.sinica.edu.tw
Students: Ho, Chun-Ming
Cancer genomics
Molecular cancer biology
Bioinformatics
 
Institute of Statistical Science 中央研究院 統計科學研究所
 

Dr. Li, Ker-Chau李克昭 kcli@stat.sinica.edu.tw
Students:  Ku, Shih-Yen; Lin, Chia-Hung
Bioinformatics
Systems biology
Lung cancer studies
High dimensional data analysis
Large ensembles of time series
Medical image analysis
Machine learning
Statistical graphics
Bayesian computation
Regression
Censoring
Experimental design
Survey sampling
 

Dr. Shieh Shwu-Rong Grace 謝叔蓉 gshieh@stat.sinica.edu.tw
Students:
Analysis of next generation sequencing data (e.g. ChIP-seq) and genomics data
Using genetic interactions to develop cancer therapeutics
Constructing gene networks/predicting pathway components
 
 

Dr. Yang, Hsin-Chou 楊欣洲 hsinchou@stat.sinica.edu.tw
Students:  Chu, Shih-Kai
Statistical genetics/genomics
● Disease gene mapping
● Population genomics
● Omics data analysis
 

Dr. Yuan, Shin-Sheng  袁新盛 syuan@stat.sinica.edu.tw
Students: Chen, Hsiu-man  
Microarray data analysis
Drug response mechanism
Medical imaging data analysis
Manipulating mass spectra database
 
 
Dr. Liu, Wei-chung 劉維中 wliu1975@stat.sinica.edu.tw
Students:
Mathematical biology
Theoretical ecology
Quantitative epidemiology
Network biology
Sociology
Systems biology
 

Dr. Yeang, Chen-Hsiang 楊振翔 chyeang@stat.sinica.edu.tw
Students:  
Cancer genomics
Molecular evolution
 

Dr. Chen, Hsuan-Yu 陳璿宇 hychen@stat.sinica.edu.tw
Students:  Lovely Raghav
● Bioinformatics
● Epidemiology and biostatistic
● Integrative cancer biology
● Personalized medicine

 
 

Huang, Yen-Tsung 黃彥棕 ythuang@stat.sinica.edu.tw
Students:
● Biostatistics
Statistical Genetics
Integrative Genomics                                                                                   ● Causal Mediation model                                                                               ● Survival Analysis                                                                                         Epidemiology                                                                                              ● Causal Inference
 
 
Research Center for Applied Sciences 中央研究院 應用科學研究中心

Dr. Lin, Jung-Hsin 林榮信 jlin@ntu.edu.tw
Students:
Pharmacoinformatics
Computational biophysics
Bioinformatics
Structural biology
Molecular simulations
 
 
Biodiversity Research Center 中央研究院 生物多樣性研究中心
 

Dr. Li, Wen-Hsiung 李文雄 whli@sinica.edu.tw
Students:  Jerome Panibe
Evolutionary genomics
Molecular evolution
Bioinformatics and computational biology
Population genetics, human genetics
 

Dr. Sen-Lin Tang 湯森林 sltang@gate.sinica.edu.tw
Students:  Kshitij Tandon
Microbial Ecology and diversity
Microbial genomics (Metagenomics0
Computational biology
 

Dr. John Wang 王忠信 johnwang@gate.sinica.edu.tw
Students:
Genetics, genomics, behavior, and evolution of social insects.
Evolution of genome size in nematodes.
 
 

Dr. Dar Yi Wang 王達益 dywang@gate.sinica.edu.tw
Students:
Metagenomics. Evolutionary genomics.


 

 

Dr. Isheng Jason Tsai 蔡怡陞 ijtsai@gate.sinica.edu.tw
Students:
Evolution of parasitism and pathogenicity.
Eukaryotic microbe (fungi and helminths) ecology and biodiversity. 
 


 

 
 
Genomics Research Center 中央研究院 基因體研究中心
 

Dr. Yang, An-Suei 楊安綏 yangas@gate.sinica.edu.tw
Students:  Jian, Jhih-Wei
The research direction in this laboratory is to engineer proteins of significant biomedical importance. We develop computational and bioinformatic approaches to design stable protein scaffolds and use phage-based molecular evolution to engineer stability in folding and affinity toward target molecules. The goal is to enhance the insight into molecular basis on protein recognition and to use the engineered proteins in biomedical applications. Specific areas of interest include:computational protein design, recombinant antibody engineering,protein-protein interaction, computational structural biology, structural bioinformatics, phage display of antibody libraries, synthetic antibody fragment library construction.
 

Dr. Trees-Juen Chuang  莊樹諄 trees@gate.sinica.edu.tw
Students:
● Bioinformatics and Computational Biology
● Comparative & evolutionary genomics post-transcriptional modification
● Systems biology
● Primate evolution
●Genome annotation
 
Institute of Plant and Microbial Biology 中央研究院 植物暨微生物學研究所
 

Dr. Hsing, Yue-Ie 邢禹依 bohsing@gate.sinica.edu.tw
Students:
Construction a Tagged Rice Population, TRIM, for functional genomics analysis
Utilization/studies of the TRIM mutant resources
Analysis of advanced rice anther transcriptomes
Positional cloning and characterization of important rice mutants
Re-annotation of genes encoding LEA proteins in the rice and soybean genomes
Characterization of LEA proteins
Collection and characterization of wild rice and soybean in Taiwan
Sequencing of Oryza nivara, an annual wild rice
 

Dr. Chen, Pao-Yang 陳柏仰 paoyang@gate.sinica.edu.tw
Students:  
● Next generation genetics
● DNA methylation in plants
● DNA methylation landscape in plants, animals, and human
 
Institute of Chemistry 中央研究院 化學研究所
 

Dr. Hsu, Chao-Ping 許昭萍 cherri@chem.sinica.edu.tw
Students:  Ignasius Joanito
Charge transport and energy transfer in advanced materials
Dynamic description of biological systems
 
Agricultural Biotechnology Research Center 中央研究院  農業生物科技研究中心

Dr. Chen, Ho-Ming 陳荷明 homing@gate.sinica.edu.tw
Students:  Chun-Yi Chen
Small RNA function
Genome of non-model organism
Institute of  Molecular Biology 中央研究院 分子生物研究所
 

Dr. Lue,  Jun-Yi 呂俊毅 jleu@imb.sinica.edu.tw
Students:
Genetic incompatibility and speciation
Experimental evolution and genomic analysis of genetic buffering
 
Institute of Bioinformatics and Structural Biology, National Tsing Hua University
國立清華大學 生物資訊與結構生物研究所
 

Dr. Yang, Lee-Wei 楊立威 lwyang@life.nthu.edu.tw
Students: Chan, Wai Soon; Emmanuel Salawu
Protein Dynamics, Polymer Physics, Molecular mechanics, Coarse-Grained model development, Enzymology, Active site prediction, Physical model-based prediction/analysis of NMR relaxation data and temperature factors of X-ray determined structures, Structure Refinement, DNA Polymerase, Homology modeling, Biological and dynamics database/online calculation tools development, Statistical analysis of biomolecular traits in dynamics, Computational techniques for large matrix decomposition, Linear response theory, Normal Mode Analysis, Langevin Dynamics, Theoretical reconciliation of lock-and-key and induce-fit paths on substrate binding.
 
Institute of Bioinformatics and Systems Biology, National Chiao Tung University
國立交通大學 生物資訊及系統生物研究所
 

Dr. Henry Lu, Horng-Shing 盧鴻興 hslu@stat.nctu.edu.tw
Students: Liu, Pei-Ling; Maria Simak
Scientific computing
Image science
Bioinformatics
 

Dr. Yang, Jinn-Moon 楊進木 moon@faculty.nctu.edu.tw
Students: Nikhil Pathak
● Bioinformatics systems biology
● Drug design
● Systems biology
 

Dr. Chu, Jhih-Wei 朱智瑋 jwchu@nctu.edu.tw
Students:
Biosystems simulation
● Multiscale modeling theory
● Protein conformational changes and alloetery
● Drug discovery and development
● Molecular kinetics
 
Institute of BioMedical Informatics, National Yang-Ming University
國立陽明大學 生物醫學資訊研究所
 

Dr. Yang, Ueng-Cheng 楊永正 yang@ym.edu.tw
Students: Boris Stitnicky
Analysis of Pathway
Bioinformatic analysis on disease candidate genes and mechanisms
 

Dr. Chang, Chuan-Hsiung 張傳雄 cchang@ym.edu.tw
Students: Wu, Jesse; Li, Shiao-Wen
Comparative genomics
Genome design and engineering
Synthetic biology
 

Dr. Huang, Hsuan-Cheng 黃宣誠 hsuancheng@ym.edu.tw
Students: Chi-Chun Chen; Divya Sahu
Networks biology
Systems biology
Bioinformatics

 

Dr. Wu, Kun-Pin 巫坤品 kpwu@ym.edu.tw
Students:  Liu, Meng-Ting
Algorithms
Computational proteomics
 

Dr. Huang,  Jie-Rong 黃介嶸 jierongh@ym.edu.tw
Students:
Structural biology
Intrinsically disordered proteins
Molecular dynamics simulation
NMR spectroscopy
 

Dr. Lin,  Chen-Ching 林振慶 ChaosLin@ym.edu.tw
Students:
Network Biology
Computational Biology
Bioinformatics
 

Dr. Huang,  Yen-Hua 黃彥華 yhhuang@ym.edu.tw
Students:
NGS data analysis and integrated interpretation (e.g. integration with heterogeneous data sources)
Annotation of new genomes and comparative genomics based data mining
Human gene expression profile analysis and regulatory circuit reconstruction
 
Graduate Institute of Biomedical Electronics and Bioinformatics, National Taiwan University
國立台灣大學 生醫電子與資訊學研究所
 

Dr. Huang,  Nien-Tsu 黃念祖 nthuang@ntu.edu.tw
Students:
developing integrated electrical, optical and mechanical miniaturized fluidics and sensors for biological applications, such as cellular biology, drug screening, and disease diagnosis

 

Dr. Lai,  Liang-Chuan 賴亮全 llai@ntu.edu.tw
Students:
using microarray or next generation sequencing to explore the cancer genomics
Investigation of regulatory mechanism of NDRG1 upon reoxygenation
Regulation of transcription and metastasis of semaphorin family in lung cancer
 

Dr. Lu,  Tzu-Pin 盧子彬 tplu@ntu.edu.tw
Students:
Bioinformatics
Microarray and next generation sequencing data analysis 
Computational Biology
 

Dr. Tseng,  Y. Jane 曾宇鳳 yjtseng@csie.ntu.edu.tw
Students:
Computational Chemistry and Toxicology
Metabolomics
 Bioinformatics                                                                       Cheminformatics                                                                                  ● Health informatics
 

Dr. Chen,  Chien-Yu 陳倩瑜 chienyuchen@ntu.edu.tw
Students:
Bioinformatics
Data Mining
Machine Learning
 

Dr. Chuang,  Eric Y. 莊曜宇 chuangey@ntu.edu.tw
Students:
Biochip Bioinformatics
Next-Generation Sequencing                                                   
Radiation Biology                
Cancer Biology   
Bioinformatics                                                    
 

Dr. Lee,  Hsin-Yu 李心 hsinyu@ntu.edu.tw
Students:
Cellular Biology
Molecular Biology
Endocrinology
 

Dr. Sun,  Wei-Zen 孫維仁 wzsun@ntu.edu.tw
Students:
Pain medicine
acupuncture and moxibustion
anesthesiology
 

Dr. Tsai,  Mon-Hsun 蔡孟勳 motiont@gmail.com
Students:
Bioinformatics
Cell Biology
Microarray
Radiation Biology

 

Dr. Huang,  Hsiao-Chun 黃筱鈞 hsiaochun@ntu.edu.tw
Students:
Molecular Cell Biology
Systems and Synthetic Biology
Cell Division                                                                               
 

Dr. Chen,  Chung-Ping  陳中平 cpchen@ntu.edu.tw
Students:
Statistical Timing Analysis
Circuit Simulation and Optimization
Microprocessor Design                                                                               
 

Dr. Kuo,  Po-Lin 郭柏齡  polin@ntu.edu.tw
Students:
Biophysics
Mechanobiology
Biomechanics   
 

Dr. Lin,  En-Chung 林恩仲 edlin01@ntu.edu.tw
Students:
Functional Genomics and Proteomics
Bioinfomatics
Statistical Biology                                                                                         ● Management and Reproduction of Transgenic Animal Science 
 

Dr. Juan, Hsueh-Fen 阮雪芬 yukijuan@ntu.edu.tw
Students:
Genomics
Bioinfomatics
●  Proteomics                                                                             
 
 
 
 
    :Eligible to Take Student


















   
TIGP Sinica IIS