| Faculty |
| Core Faculty |
| Institute of Information Science
中央研究院資訊科學研究所 |
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|
| Dr. Tsai ,
Huai-Kuang 蔡懷寬 hktsai@iis.sinica.edu.tw |
| Students: Tsai, Zing
Tsung-Yeh; Liu, Wan-Hsin |
● Evolutionary Algorithm
● Bioinformatics
● Regulatory Mechanism
● Metagenomics
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| |
|
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| Dr. Sung , Ting-Yi 宋定懿
tsung@iis.sinica.edu.tw |
| Students: Chang, Hui-Yin; Lih,
Tung-Shing |
● Graph Algorithms
● Interconnection Networks for Parallel and Distributed
Systems
● Bioinformatics with focus on proteomics studies
● Mathematical Programming
|
| |
 |
| Dr. Hsu, Wen-Lian
許聞廉
hsu@iis.sinica.edu.tw |
| Students: Ján Zahornadský |
●
Analysis of algorithms, graph theory.
● Search methods
in artificial intelligence.
● Bioinformatics,
computational biology.
● Computational
linguistics.
● Natural
language understanding.
● Intelligent
agent systems
|
| |
| Institue of Biomedical Science
中央研究院 生物醫學科學研究所 |
| |
|
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| Dr. Hwang, Ming-Jing 黃明經 mjhwang@ibms.sinica.edu.tw |
| Students: |
● Bioinformatics
● Computational Biology
● Systems Biology |
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 |
| Dr. Lin, Jung-Hsin 林榮信 jlin@ntu.edu.tw |
| Students: |
●
Pharmacoinformatics
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Computational Biophysics
●
Bioinformatics
●
Structural Biology
●
Molecular Simulations |
| |
|
 |
| Dr. Jou, Yuh-Shan 周玉山 jou@ibms.sinica.edu.tw |
| Students: Ho, Chun-Ming |
●
Cancer Genomics
●
Molecular Cancer Biology
●
Bioinformatics |
| |
| Institue of Statistical Science
中央研究院 統計科學研究所 |
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 |
|
Dr. Li, Ker-Chau李克昭 kcli@stat.sinica.edu.tw |
| Students:
Liu, Chia-Hsin; Ku, Shih-Yen |
●
Bioinformatics
●
Systems biology
●
Lung cancer studies
●
High dimensional data analysis
●
Large ensembles of time series
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Medical image analysis |
●
Machine learning
●
Statistical graphics
●
Bayesian computation
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Regression
●
Censoring
●
Experimental design
●
Survey sampling |
| |
|
 |
| Dr. Shieh Shwu-Rong Grace 謝叔蓉 gshieh@stat.sinica.edu.tw |
| Students: Tiong, Khong-Loon |
●
Analysis of next generation sequencing data (e.g.
ChIP-seq) and genomics data
●
Using genetic interactions to develop cancer
therapeutics
●
Constructing gene networks/predicting pathway
components |
| |
|
 |
| Dr. Yang, Hsin-Chou 楊欣洲 hsinchou@stat.sinica.edu.tw |
| Students: Huang, Mei-Chu; Chu, Shih-Kai |
●
Statistical Genetics/Genomics
●
Disease Gene Mapping
●
Population Genomics
●
Omics Data Analysis |
| |
|
 |
| Dr. Yuan, Shin-Sheng 袁新盛 syuan@stat.sinica.edu.tw |
| Students: |
● Microarray data
analysis
● Drug response mechanism
● Medical imaging data
analysis
● Manipulating mass spectra
database |
| |
| |
| Dr. Liu, Wei-chung 劉維中 wliu1975@stat.sinica.edu.tw |
| Students: Lai, Shu-Mei |
●
Mathematical biology
●
Theoretical ecology
●
Quantitative epidemiology
●
Network biology
●
Sociology
●
Systems biology |
| |
|
 |
| Dr. Yeang, Chen-Hsiang 楊振翔 chyeang@stat.sinica.edu.tw |
| Students: |
●
Cancer genomics
●
Molecular evolution |
| |
| Biodiversity Research Center 中央研究院
生物多樣性研究中心 |
| |
|
 |
| Dr. Li, Wen-Hsiung 李文雄 whli@sinica.edu.tw |
| Students: Bernhard Schaefke;
Lin, Jinn-Jy; Kevin Tsai |
●
Evolutionary Genomics
●
Molecular Evolution
●
Bioinformatics and Computational Biology
●
Population Genetics, Human Genetics |
| |
| Genomics Research Center 中央研究院
基因體研究中心 |
| |
|
 |
| Dr. Yang, An-Suei 楊安綏 yangas@gate.sinica.edu.tw |
| Students: Peng, Hung-Pin;
Jian, Jhih-Wei |
| The research direction in this laboratory is to
engineer proteins of significant biomedical importance.
We develop computational and bioinformatic approaches to
design stable protein scaffolds and use phage-based
molecular evolution to engineer stability in folding and
affinity toward target molecules. The goal is to enhance
the insight into molecular basis on protein recognition
and to use the engineered proteins in biomedical
applications. Specific areas of interest
include:computational protein design, recombinant
antibody engineering,protein-protein interaction,
computational structural biology, structural
bioinformatics, phage display of antibody libraries,
synthetic antibody fragment library construction. |
| |
|
 |
| Dr. Trees-Juen Chuang 莊樹諄 trees@gate.sinica.edu.tw |
| Students: |
●
Bioinformatics and Computational Biology
●
Comparative & Evolutionary GenomicsPost-transcriptional
Modification
●
Systems Biology
●
Primate Evolution
●Genome Annotation |
| |
| Institute of Plant and Microbial
Biology 中央研究院 植物暨微生物學研究所 |
| |
|
 |
| Dr. Hsing, Yue-Ie 邢禹依 bohsing@gate.sinica.edu.tw |
| Students: |
●
Construction a Tagged Rice Population, TRIM, for
functional genomics analysis
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Utilization/studies of the TRIM mutant resources
●
Analysis of advanced rice anther transcriptomes
●
Positional cloning and characterization of
important rice mutants
●
Re-annotation of genes encoding LEA proteins in the
rice and soybean genomes
●
Characterization of LEA proteins
Collection and characterization of wild rice and soybean
in Taiwan
Sequencing of Oryza nivara, an annual wild rice |
| |
|
 |
| Dr. Chen, Pao-Yang 陳柏仰 paoyang@gate.sinica.edu.tw |
| Students: |
●
Next generation genetics
●
DNA methylation in plants
●
DNA methylation landscape in plants, animals, and human |
| |
| Institute of Chemistry 中央研究院
化學研究所 |
| |
|
 |
| Dr. Hsu, Chao-Ping 許昭萍 cherri@chem.sinica.edu.tw |
| Students: Chepyala, Surendhar
Reddy |
●
Charge transport and energy transfer in advanced
materials
●
Dynamic description of biological systems |
| |
| Agricultural Biotechnology
Rerearch Center 中央研究院 農業生物科技研究中心 |
|
 |
| Dr. Chen, Ho-Ming 陳荷明 homing@gate.sinica.edu.tw |
| Students: |
●
Small RNA Function
●
Genome of non-model
organism
|
| |
Institute of Bioinformatics and
Structural Biology, National Tsing Hua University
國立清華大學 生物資訊與結構生物研究所 |
| |
|
 |
| Dr. Yang, Lee-Wei 楊立威 lwyang@life.nthu.edu.tw |
| Students: Chan, Wai Soon;
Emmanuel Salawu |
| Protein Dynamics, Polymer Physics, Molecular
mechanics, Coarse-Grained model development, Enzymology,
Active site prediction, Physical model-based
prediction/analysis of NMR relaxation data and
temperature factors of X-ray determined structures,
Structure Refinement, DNA Polymerase, Homology modeling,
Biological and dynamics database/online calculation
tools development, Statistical analysis of biomolecular
traits in dynamics, Computational techniques for large
matrix decomposition, Linear response theory, Normal
Mode Analysis, Langevin Dynamics, Theoretical
reconciliation of lock-and-key and induce-fit paths on
substrate binding. |
| |
Institute of Bioinformatics and
Systems Biology, National Chiao Tung University
國立交通大學 生物資訊及系統生物研究所 |
| |
|
 |
| Dr. Henry Lu, Horng-Shing 盧鴻興 hslu@stat.nctu.edu.tw |
| Students: Liu, Pei-Ling;
Maria Simak |
●
Scientific computing
●
Image science
●
Bioinformatics |
| |
Institute of BioMedical
Informatics, National Yang-Ming University
國立陽明大學 生物醫學資訊研究所 |
| |
|
 |
| Dr. Yang, Ueng-Cheng 楊永正 yang@ym.edu.tw |
| Students: Boris
Stitnicky |
●
Analysis of Pathway
●
Bioinformatic Analysis on Disease Candidate Genes
and Mechanisms |
| |
|
 |
| Dr. Chang, Chuan-Hsiung 張傳雄 cchang@ym.edu.tw |
| Students: Wu, Jesse; Li,
Shiao-Wen |
● Comparative Genomics
● Genome Design and
Engineering
● Synthetic Biology |
| |
|
 |
| Dr. Huang, Hsuan-Cheng 黃宣誠 hsuancheng@ym.edu.tw |
| Students: |
●
Networks Biology
●
Systems Biology
●
Bioinformatics |
| |
|
 |
| Dr. Wang, Hsei-Wei 王學偉 hwwang@ym.edu.tw |
| Students: |
●
Bioinformatics
●
Viral Oncology |
| |
|
 |
| Dr. Wu, Kun-Pin 巫坤品 kpwu@ym.edu.tw |
| Students: Tien, Wei-Sheng;
Lai, En-Yu; Liu, Meng-Ting |
●
Algorithms
●
Computational Proteomics |
| |
|
 |
| Dr. Peng, Jyh-Ying 彭智楹 jypeng@ym.edu.tw |
| Students: |
● Biomedical
Imaging Analysis
● Cell Display and Morphological Quantification
● Statistical Machine Learning |
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